The active maintenance of information in visual working memory (WM) is known to rely on the sustained activity over functional networks including frontal, parietal, occipital, and temporal cortices. Previous studies have described interference‐based disturbances in the functional coupling between prefrontal and posterior cortices, and that such disturbances can be restored for a successful WM performance after the presentation of the interfering stimulus. However, very few studies have applied functional connectivity measures to the analysis of the brain dynamics involved in overriding emotional distraction, and all of them have limited their analysis to the particular connections between the amygdala and prefrontal cortex. In this study, we used magnetoencephalography (MEG) to characterize the mutual information–based functional connectivity dynamics among regions of interest located over the prefrontal, the parietal, the temporal, and the occipital cortex. Our results show that the detection of emotional distraction at early latencies (50–150 ms) induces a reduction of functional connectivity involving parietal and temporal cortices that are part of the frontoposterior WM network, while functional coupling among prefrontal areas and between them and posterior cortices is strengthened during the detection of emotional distractors. Later in the processing of the distractor (250–350 and 360–460 ms), the frontoposterior coupling is reestablished for a successful performance, while the orbitofrontal and ventrolateral prefrontal cortex become strongly connected to posterior cortices as a mechanism to cope with emotional distractors.